CDS

Accession Number TCMCG006C54193
gbkey CDS
Protein Id XP_013726627.1
Location complement(join(126136..126273,126359..126426,126506..126641,126740..127186,127291..127403,127487..127547,127641..127700,127782..127829,127915..127994,128452..128554))
Gene LOC106430390
GeneID 106430390
Organism Brassica napus

Protein

Length 417aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013871173.2
Definition splicing factor U2af large subunit B-like isoform X3 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description U2 snRNP auxiliary factor large subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12837        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCTTCATCTACCCAACGTTATTTTGTTCCTTAACTGCTTGTTGTTTTTGATTTTACGTAGTTTGGAAAGATCATTATCAATTACACGGTGTAACTTTGCAGGCCAGGTTCCTAGTGTGCCAGCTACTGCTAGTATTCCAGGGATGTTCCCCAACATGCTTGCAATGGTCCCTGGTCAGCAAATGGGAGCGCTTCCTTTACTGCCAATGCAGGCAATGACTCAGCAGGCAACTAGGCATGCTCGACGAGTTTATGTTGGTGGCCTTCCACCCACTGCAAATGAACAGTCGGTTGCAACTTTCTTTAGCCAAGTGATGTCGGCGATTGGGGGAAACACTGCTGGGCTAGGCGATGCGGTGGTCAATGTTTACATAAACCATGAAAAGAAGTTCGCTTTTGTGGAGATGAGATCTGTTGAGGAGGCTAGTAATGCAATGGCACTAGACGGAATTATATTAGAGGGGGTTCCTGTAAAGGTGAGGAGGCCAACTGACTATAACCCGTCGCTTGCTGCAGCTCTTGGCCCGAGCCAGCCGAATCCCAGTCTCAATTTGGCGGCTGTTGGATTGTCTTCGGGGTCTACCGGTGGGCTTGAGGGTCCGGACCGCATTTTTGTTGGTGGGCTTCCTTATTACTTCACAGAAGAACAGATCAGGGAGCTCTTGGAGTCTTTTGGGCCCCTGAGAGGTTTTAACTTGGTTAAAGACAGGGAAACTGGAAACTCGAAGGGATATGCTTTTTGTGTTTTCCAAGATCCTTCAGTGACAGATATTGCTTGTGCCGCTCTAAACGGGATTAAGATGGGTGATAAGACACTTACAGTGAGGCGTGCAGTCCAGGGTGTGATTCAACCTAAACCTGAGCAAGAGGAAGTATTACTTCATGCTCAACAGCAGATTGCTTTGCAGAGGCTTATGCTACAACCGGGAAGCACGCCAACCAAGATTGTATGTTTGACTCAAGTGGTTACAGCTGATGATCTTGGAGACGATGAAGAACATGAAGACATAATGGAGGACATGAGACAAGAAGGTGGAAAATTCGGTAACTTGGTGAATGTTGTGATTCCGAGGCCCAATCCTGATCATGATCCAACACCAGGAGTTGGAAAGGTTTTCTTAGAGTATGCGGATGTAGATGGCGCAGCAAAGGCCAGATCGGGAATGAACGGAAGAAAATTTGGAGGAAACCAAGTGGTTGCTGTGTATTACCCCGAGAACAAGTTTGCACAAGGCGACTACGAAGGCTGA
Protein:  
MLLHLPNVILFLNCLLFLILRSLERSLSITRCNFAGQVPSVPATASIPGMFPNMLAMVPGQQMGALPLLPMQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGLGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAALGPSQPNPSLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVFQDPSVTDIACAALNGIKMGDKTLTVRRAVQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGSTPTKIVCLTQVVTADDLGDDEEHEDIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGAAKARSGMNGRKFGGNQVVAVYYPENKFAQGDYEG